Education Calender 2017-2018
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Renewable Energies and Environment
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Life Science Engineering
Contact Number: دفتر گروه : 61115774 - 88497302، اتاق: 86093285
mehrnejad [AT] ut.ac.ir
معاون گروه مهندسی علوم زیستی
ورود به صفحه اطلاعات علمی و پژوهشی
Articles And Books
B.Sc , 1998, Biology, Esfahan
M.Sc , 2001, Biophysics, Tarbiat Modares
Ph.D , 2006, Biophysics, Tarbiat Modares
Biology, Member, National, 2013/07/04
, Hossein Goudarzi, Fatemeh Karimi , Fahimeh Asadi Amoli , Zohreh Abedinyfar , Farahnoosh Doustdar , and Faramarz Mehrnejad. "Genetic fingerprinting and antimicrobial susceptibility profiles of Pseudomonas aeruginosa isolates from eye infections." IRANIAN JOURNAL OF CLINICAL INFECTIOUS DISEASES 6, no. 1 (2011): 41-46.
, , and Faramarz Mehrnejad. "Oxidative markers in five Iranian alfalfa (Medicago sativa L.) cultivars under salinity stress." Iranian Journal of Plant Physiology 3, no. 4 (2013): 793.
Mehrnejad, Faramarz, and Mahboubeh Zarei. "Molecular dynamics simulation study of the interaction of Piscidin 1 with DPPC bilayers: structure-activity relationship.." Journal of Biomolecular Structure and Dynamics 27, no. 4 (2010): 551-560.
Mehrnejad, Faramarz, Mahmoud Khadem-Maaref, Mohammad Mehdi Ghahremanpour, and Farahnoosh Doustdar. "Mechanisms of amphipathic helical peptide denaturation by guanidinium chloride and urea: a molecular dynamics simulation study." Journal of Computer-Aided Molecular Design 24, no. 10 (2010): 829-841.
JAMEHDOR, SALEH, Mahdi Zarabi, Faramarz Mehrnejad, and vahid yavarpour kordestani. "In vitro Evaluation of antibacterial efficacy of aqueous extracts of Iranian Native Plants on the Standard Strains of Pseudomonas aeruginosa." Iranian Journal of Medical Microbiology 2, no. 1393 (2014): 51.
Rahmanpour , Arezo, , Faramarz Mehrnejad, and Majid Erfani Moghadam. "Interaction of Piscidin-1 with zwitterionic versus anionic membranes: a comparative molecular dynamics study." Journal of Biomolecular Structure and Dynamics 31, no. 12 (2012): 1.
Mehrnejad, Faramarz, and Nader Chaparzadeh. "Structural and dynamical studies of Humanin in water and TFE/water mixture: a molecular dynamics simulation.." Journal of Biomolecular Structure and Dynamics 26, no. 2 (2008): 255-262.
Sadredinamin, Mehrzad Sadredinamin1,2, Faramarz Mehrnejad, Peyman Hosseini, and Farahnoosh Doustdar . "Antimicrobial Peptides (AMPs)." Novelty in Biomedicine 4, no. 2 (2016): 70-76.
Khoshbakht, Sepideh, Davood Beiki, Parham Geramifar, Farzad Kobarfard, Omid Sabzevari, Mohsen Amini, Faramarz Mehrnejad, and Soraya Shahhosseini. "Synthesis, Radiolabeling, and Biological Evaluation of Peptide LIKKPF Functionalized with HYNIC as Apoptosis Imaging Agent." IRANIAN JOURNAL OF PHARMACEUTICAL RESEARCH 15, no. 2 (2016): 415-424.
Mehrnejad, Faramarz, Hossein Naderi-Manesh, Bijan Ranjbar, Bahman Maroufi, Ahmad Asoodeh, and Farahnoosh Doustdar. "PCR-based Gene Synthesis, Molecular Cloning, High Level Expression, Purification, and Characterization of Novel Antimicrobial Peptide, Brevinin-2R, in Escherichia Coli." APPLIED BIOCHEMISTRY AND BIOTECHNOLOGY PART A ENZYME ENGINEERING AND BIOTECHNOLOGY 149, no. 2 (2007): 109-118.
Mehrnejad, Faramarz, Hossein Naderi-manesh, and Bijan Ranjbar. "The structural properties of magainin in water, TFE/water, and aqueous urea solutions: molecular dynamics simulations.." Proteins: Structure, Function, and Bioinformatics 67, no. 4 (2007): 931-940.
Yahyaei, Mohammad, Faramarz Mehrnejad, Hossein Naderi-Manesh, and Ali Hossein Rezayan. "Follicle-stimulating hormone encapsulation in the cholesterol-modified chitosan nanoparticles via molecular dynamics simulations and binding free energy calculations." European Journal of Pharmaceutical Sciences 107, no. 108 (2017): 126-137.
Pazhang, Mohammad, Faramarz Mehrnejad, Yagoob Pazhang, Hanieh Falahati, and Nader Chaparzadeh. "Effect of sorbitol and glycerol on the stability of trypsin and difference between their stabilization effects in the various solvents." BIOTECHNOLOGY AND APPLIED BIOCHEMISTRY , no. (2015): n/a-n/a.
, , Younes Aftabi, Meysam Dolati, Faramarz Mehrnejad, and Mohammad Pessarakli. "Salinity Tolerance Ranking Of Various Wheat Landraces From The West Of The Urmia Saline Lake In Iran By Using Physiological Parameters." Journal of Plant Nutrition 37, no. 7 (2014): 1025-1039.
Aftabi, Younes, Abasalt Hosseinzadeh Colagar, and Faramarz Mehrnejad. "An in silico approach to investigate the source of the controversial interpretations about the phenotypic results of the human AhR-gene G1661A polymorphism." JOURNAL OF THEORETICAL BIOLOGY 393, no. (2016): 1-15.
Mehrnejad, Faramarz, Mohammad Mehdi Ghahremanpour, and Majid Erfani Moghadam. "Structural studies of SNARE complex and its interaction with complexin by molecular dynamics simulation." BIOPOLYMERS 93, no. 6 (2010): NA-NA.
Jafari, Majid, Faramarz Mehrnejad, Raheleh Aghdami, Nader Chaparzadeh, Zahra Razaghi Moghadam, and Farahnoosh Doustdar. "Identification of the Crucial Residues in the Early Insertion of Pardaxin into Different Phospholipid Bilayers." JOURNAL OF CHEMICAL INFORMATION AND MODELING 2, no. 1 (2017): 10.
Salar, Safoura, Faramarz Mehrnejad, Reza H. Sajedi, and javad Mohammadnejad arough. "Chitosan Nanoparticles-Trypsin Interactions: Bio-physicochemical and Molecular Dynamics Simulation Studies." International Journal of Biological Macromolecules 25, no. 103 (2017): 902-909.
Ighaei Bonab, Masoumeh, Jaber Jahhanbin Sardroodi, Alireza Rastkar Ebrahimzadeh, and Faramarz Mehrnejad. "Molecular Interactions in the Systems Composed of Curcumin, Water and Single-Walled Carbon Nanotube: A Molecular Dynamics Simulation Study." Journal of Computational and Theoretical Nanoscience 12, no. 9 (2015): 2077-2083.
, Farahnoosh Doustdar, Mohammad Pazhang, Faramarz Mehrnejad, Mehrnoosh Safarzadeh, Davod Rabiei, Nader Chaparzadeh, Hanieh Falahati, and Mohammad Mir-Derikvand. "Biochemical Characterization and Computational Identification of Mycobacterium tuberculosis Pyrazinamidase in Some Pyrazinamide-Resistant Isolates of Iran." PROTEIN JOURNAL 34, no. 3 (2015): 181-192.
Khadem-Maaref, Mahmoud, Faramarz Mehrnejad, and Arash Phirouznia. "Effects of metal-ion replacement on pyrazinamidase activity: A quantum mechanical study." Journal of Molecular Graphics and Modelling 73, no. 3 (2017): 24-29.
Ighaei Bonab, Masoumeh, Jaber Jahanbin Sardroodi, Alireza Rastkar Ebrahimzadeh, and Faramarz Mehrnejad. "A computational study of the electronic structure and the chemical activity of curcumin and some novel curcuminoids by density functional theory." Journal of the Iranian Chemical Society 14, no. 2 (2017): 357-364.
Aftabi, Younes, Abasalt Hosseinzadeh Colagar, Faramarz Mehrnejad, Ensiyeh Seyedrezazadeh, and Emad Moudi. "Aryl hydrocarbon receptor gene transitions (c.-742C>T; c.1661G>A) and idiopathic male infertility: a case-control study with in silico and meta-analysis." Environmental Science and Pollution Research 1, no. 1 (2017): 100.
Mahmoodi, Yasaman, Faramarz Mehrnejad, and Khosrow Khalifeh. "Understanding the interactions of human follicle stimulating hormone with single-walled carbon nanotubes by molecular dynamics simulation and free energy analysis." European Biophysics Journal 46, no. 6 (2017): 1-9.
Jafari, Majid, Faramarz Mehrnejad, and Farahnoosh Doustdar. "Insight into the interactions, residue snorkeling, and membrane disordering potency of a single antimicrobial peptide into different lipid bilayers." PLOS ONE 12, no. 11 (2017): e0187216.
Majid, Jafari, and Faramarz Mehrnejad. "Molecular Insight into Human Lysozyme and Its Ability to Form Amyloid Fibrils in High Concentrations of Sodium Dodecyl Sulfate: A View from Molecular Dynamics Simulations." PLOS ONE 11, no. 10 (2016): e0165213.
Chamani, Reyhane, Mohsen Asghari, Ali Mohammad Alizadeh, Kamran Mansouri, Taher Doroudi, Peir Hossein Kolivand, Hossein Ghafouri, Somayeh Ehteshame, Hanieh Rabouti, and Faramarz Mehrnejad. "The antiangiogenic and antitumor activities of the N-terminal fragment of endostatin augmented by Ile/Arg substitution: The overall structure implicated the biological activity." BIOCHIMICA ET BIOPHYSICA ACTA PROTEINS AND PROTEOMICS 1864, no. 12 (2016): 1765-1774.
Khoshbakht, Sepideh, Farzad Kobarfard, Davood Beiki, Omid Sabzevari, Mohsen Amini, Faramarz Mehrnejad, Kimia Tabib, and Soraya Shahhosseini. "HYNIC a bifunctional prosthetic group for the labelling of peptides with 99mTc and 18FDG." Journal of Radioanalytical and Nuclear Chemistry 307, no. 2 (2016): 1125-1134.
, , Faramarz Mehrnejad, , Alireza Rastkar Ebrahimzadeh, and Sadegh Afshari. "Investigation of effect of Carbon nanotube on solubility of different isomers of curcumin by Molecular Dynamic Simulation." Nanocomputation, Tehran, February 15-16, 2013 .
Morad, Elham, Faramarz Mehrnejad, Bahram Golyaei , and Ali akbar Sabouri. "Prediction of Bovine Carbonic Anhydrase II binding sites by computational solvent mapping." ICB 2014 : 5th Iran Conference on Bioinformatics,, May 20-22, 2014 .
, , Faramarz Mehrnejad, , and . "Study of Interactions Between Antimicrobial Peptide LAH4 and Model Membranes." The First International 11th Iran Biophysical Chemistry Conference, Ardebil, June 12-14, 2012 .
, , Faramarz Mehrnejad, , , , , and . "Molecular Cloning Overexpression and Biochemical Characterization of Pyrazinamidase from M. Tuberculosis." The First International 11th Iran Biophysical Chemistry Conference, Ardebil, June 12-14, 2012 .
Alimohammadi, Masumeh , Faramarz Mehrnejad, , and . "Effects of osmolytes on the Protein stability: Molecular dynamics simulation." 1st Tabriz International Life Science Conference and 12thIran Biophysical Chemistry Conference (TILSC & IBCC), 2013, Tabriz, Iran, Tabriz, May 22-24, 2013 .
, , , Alireza Rastkar Ebrahimzadeh, and Faramarz Mehrnejad. "A Computational Analysis of Interactions of Curcuminoids with Human Serum Albumin." The First International & 11th Iran Biophysical Chemistry Conference 13-15 June 2012 Ardabil University of Medical Sciences, Ardabil, Iran,, June 13-15, 2012 .
, , Faramarz Mehrnejad, Zohreh Abedinyfar, Fahimeh Asadi Amoli, Fatemeh Karimi, Robab Azargun, and Hossein Goudarzi. "Analysis of Quorum sensing related genes in virulence of different genotypes of Pseudomonas aeroginosa isolated from keratitis and conjunctivities.." 14th International Iranian Congress of Microbiology, Tehran, August 23-28, 2013 .
, , Faramarz Mehrnejad, , and Alireza Rastkar Ebrahimzadeh. "The Study of Hydrogen Bonds Between Curcuminoids and C1B Subdomain of Protein Kinase C By Docking Method." 1st Tabriz International Life Science Conference and 12thIran Biophysical Chemistry Conference (TILSC & IBCC), 2013, Tabriz, Iran, Tabriz, May 22-24, 2013 .
, , Faramarz Mehrnejad, , , , , , and . "Study of the Structure-Activity Relationship of Pyraziamidase Using Molecular Docking and Molecular Dynamics Simulations." The First International 11th Iran Biophysical Chemistry Conference, Ardebil, June 12-14, 2012 .
Taran, Masomeh, Ghasem Amoabediny, Faramarz Mehrnejad, and Faezeh Kashanian. "Spectroscopic studies on the interaction of bovine serum albumin with NMBPS (Nano Magneto Bio Polymer System) nanoparticle." 5th International Congress on Nanoscience & Nanotechnology (ICNN2014), Tehran, October 22-24, 2014 .
Aghdami, Raheleh, Faramarz Mehrnejad, Nader Chaparzadeh, and Ali Reza Rastkar Ebrahimzadeh. "Study of Anticancer Peptide Interacting with Model Membranes: Molecular Dynamics Simulation." First International and 13th Iranian Genetics Congress,, May 24-26, 2014 .
Khazeh, Narges, Mohammad Pazhang, Faramarz Mehrnejad, and Nader Chaparzadeh. "Cloning and Expression of GranzymeM cDNA." First International and 13th Iranian Genetics Congress,, May 24-26, 2014 .
Khahjezadeh, mohadeseh, Mohammad Pazhang, Nader Chaparzadeh, Farahnoosh Doustdar, Mehrnoosh Safarzadeh, and Faramarz Mehrnejad. "High Level Expression and Purification of PZase and Study of Osmolyte Effects on its Activity." First International and 13th Iranian Genetics Congress,, May 24-26, 2014 .
Ali mohammadi, Masoumeh, Faramarz Mehrnejad, Mahmood Khadem-Maaref, and Nader Chaparzadeh. "Molecular Dynamics Simulation Studies on stabilizers used in immunoglobulin products." 12th International Congress of Immunology & Allergy of Iran Milad Tower-Tehran-Iran,, May 29-2, 2014 .
Oroojalian, F., Ali Hossein Rezayan, Kh. Abnous, Faramarz Mehrnejad, H. Parhiz, and M. Ramezani. "Synthesis of poly(amino ester) containing alkyne side chain for conjugation of anticancer drugs to the back-bone polymer by click reaction." The 1 st middle east & the 6th Iranian Controlled Release Conference 2014,, February 25-27, 2014 .
Khajehzadeh, Mohadeseh, Faramarz Mehrnejad, Mohammad Pazhang, and Farahnoosh Doustdar. "Effects of sorbitol and glycerol on the structure, dynamics, and stability of Mycobacterium tuberculosis pyrazinamidase.." 2nd Asian African Congress of Mycobacteriology, Isfahan, February 25-28, 2017 .
Biophysic Molecular Cell Biology
Foundations, biomimetic nanotechnology
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